Xist-dependent imprinted X inactivation and the early developmental consequences of its failure
single cell sequencing;SNS;单细胞测序;单细胞多组学- Nat Struct Mol Biol
- 2017
- 18.361
- 24(3):226-233.
- Mouse
- 单细胞测序
- Pre-implantation embryo cells (research targets sex chromosomes)
- 技术分享
- 182
- 其它细胞
- GSE80810
Abstract
The long noncoding RNA Xist is expressed from only the paternal X chromosome in mouse preimplantation female embryos and mediates transcriptional silencing of that chromosome. In females, absence of Xist leads to postimplantation lethality. Here, through single-cell RNA sequencing of early preimplantation mouse embryos, we found that the initiation of imprinted X-chromosome inactivation absolutely requires Xist. Lack of paternal Xist leads to genome-wide transcriptional misregulation in the early blastocyst and to failure to activate the extraembryonic pathway that is essential for postimplantation development. We also demonstrate that the expression dynamics of X-linked genes depends on the strain and parent of origin as well as on the location along the X chromosome, particularly at the first 'entry' sites of Xist. This study demonstrates that dosage-compensation failure has an effect as early as the blastocyst stage and reveals genetic and epigenetic contributions to orchestrating transcriptional silencing of the X chromosome during early embryogenesis.
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